As stated on the title, crafting honey blocks in survival mode using the crafting grid of the inventory makes the honey disappear:

• If crafting just one honey block: the honey disappears
• If crafting more than one at the same time: it's given the correct amount of honey blocks.
• If crafting one honey block after another: the first block disappears, the second one too, but is dropped after crafting the third, this and the fourth are created normally.
• Crafting using 64 honey bottles: the first two blocks aren't created and the other 14 are quickly crafted one after another, not at the same time.