After the MacBook Pro Graphics Update 2.0 update for MacBook Pro's made after 2012 I get the following issues (but not immediately after updating):
If Advanced OpenGL is ON, going from F11 full screen to window, or visa versa during gameplay, and after world has loaded completely (seems to be intermittent if just beginning to play) will cause the whole machine to stop responding. If you wait long enough, you may get brief functionality(2 seconds) but only solution seems to be a force restart.
Frame rate issues with huge lag spikes (With V-Sync off I was previously getting between 60 - 200 FPS, now between 15-60)
Minecart jitter with audio issues